getDimRedData.Rd
Obtain dimensional reduction data
getDimRedData(object, of_sample = "", method_dr = c("UMAP", "TSNE")) getUmapData(object, of_sample = "") getTsneData(object, of_sample = "")
object | A valid spata-object. |
---|---|
of_sample | The sample(s) of interest specified as a single character value or vector. If set to "" (the default) the first sample is chosen. |
method_dr | Character value. The dimensional reduction method of interest specified as a single character value. (Currently either 'UMAP' or 'TSNE'). |
A data.frame that contains the unique identifiers (keys): barcodes, sample and:.
getTsneData()
: tsne1, tsne2
getUmapData()
: umap1, umap2