Download data from publications

Downloads processed data as used in publications revolving around SPATA2. See details for valid input options.

downloadFromPublication(pub, sample_name)

Arguments

pub

Character value. The publication of interest.

id

Character value. The id of the data object of interest.

Value

Depends argument input.

Details

The following data can be downloaded.

From Kueckelhaus et al., 2024 with pub = 'Kueckelhaus_et_al_2024'.

• id = 'UKF313T'An object of class SPATA2 containing human glioblastoma Visium data.

• id = 'UKF269T'An object of class SPATA2 containing human glioblastoma Visium data.

• id = 'UKF265C'An object of class SPATA2 containing human neocortex Visium data.

• id = 'MCI_LMU'An object of class SPATA2 containing injured mouse cortex Visium data.

Examples

  # download the processed SPATA2 object from sample UKF313T from Kueckelhaus et al., 2024.
 objectT313 <- downloadFromPublication(pub = "kueckelhaus_et_al_2024", what = "UKF313T")