joinWith.Rd
These functions have been deprecated in favor of joinWithVariables()
.
joinWith(
object,
spata_df = getCoordsDf(object),
features = NULL,
gene_sets = NULL,
method_gs = NULL,
genes = NULL,
smooth = FALSE,
smooth_span = NULL,
verbose = NULL,
normalize = NULL,
...
)
joinWithFeatures(
object,
spata_df = getCoordsDf(object),
features,
smooth = FALSE,
smooth_span = 0.02,
verbose = TRUE,
...
)
joinWithGenes(
object,
spata_df = getCoordsDf(object),
genes,
average_genes = FALSE,
uniform_genes = "keep",
smooth = FALSE,
smooth_span = 0.02,
normalize = TRUE,
verbose = NULL,
...
)
joinWithGeneSets(
object,
spata_df = getCoordsDf(object),
gene_sets,
method_gs = "mean",
smooth = FALSE,
smooth_span = 0.02,
normalize = TRUE,
verbose = TRUE,
ignore = T,
...
)