Tissue section belonging of spatial annotations — whichTissueSection • SPATA2

Checks to which tissue section the spatial annotation belongs. (Only required in case of multiple tissue sections per sample.)

whichTissueSection(object, id)

Arguments

object: An object of class SPATA2 or, in case of S4 generics, objects of classes for which a method has been defined.
id: Character value. The spatial annotation ID of interest.

Value

Character value.

Examples


library(SPATA2)

object <- example_data$object_lmu_mci_diet

object <- identifyTissueOutline(object)

plotSurface(object, color_by = "tissue_section") +
  ggpLayerSpatAnnOutline(object, ids = c("inj1", "inj2"))

whichTissueSection(object, id = "inj1")

whichTissueSection(object, id = "inj2")