The SpatialTrajectoryScreening - class

S4 class that contains input for and output of the function spatialTrajectoryScreening().

Slots

binwidth

numeric. The width of the bins in which the barcode-spots are put based on the projection length values.

coords

data.frame. Coordinates data.frame of the sample.

id

character. The ID of the screened trajectory.

method_padj

character. The method with which p-values were adjusted.

models

data.frame. The model data.frame that has been used for the screening.

n_bins

numeric. The number of bins in which the barcode-spots are distributed based on their projection length.

results

data.frame. A data.frame that contains the model evaluations

sample

character. The sample name.

summarize_with

character. The name of the function that has been used to summarize the variables by bin.

spatial_trajectory

SpatialTrajectory. The spatial trajectory based on which the screening took place.