Obtain LFC name

Extracts name of variable that contains log fold change results of DEA.

getDeaLfcName(object, across = getDefaultGrouping(object), method_de = NULL)

Arguments

object

An object of class spata2.

across

Character value or NULL. Specifies the grouping variable of interest.

Use getGroupingOptions() to obtain all variable names that group the barcode spots of your object in a certain manner.

method_de

Character value. Denotes the method to according to which the de-analysis is performed. Given to argument test.use of the Seurat::FindAllMarkers()-function. Run SPATA::dea_methods to obtain all valid input options.

Value

Character value.